{"task": {"agent_timeout": 3600, "task": "bix-13-q4", "verifier_timeout": 600, "instruction": "\nHere is the question you need to address:\n\n<question>\nUsing DESeq2 to conduct differential expression analysis relative to strain JBX1, what is the total percentage of genes that are uniquely statistically differentially expressed in \u2206lasI (JBX98) or \u2206rhlI (JBX97). Use a Benjamini-Hochberg False Discovery Rate correction threshold of 0.05.\n</question>\n\n\nPerform data analysis in /workspace/notebook.py to analyze data files in /workspace/\n\nSubmit your final answer as a single string with your short answer in /workspace/answer.txt\nIMPORTANT: Wrap your answer in XML tags <answer> </answer>\nExample output:\n```\necho \"<answer>Your concise answer to the question</answer>\" > /workspace/answer.txt\n```\nRemember, the final file should contain all necessary artifacts (plots, tables, print outputs) to solve the task provided.\n\n\nGeneral Guidelines:\n- Write small to medium-sized chunks for easier debugging.\n- Check dataframe shapes before printing. Use head() for large dataframes.\n\nAVOID USING PLOTS/IMAGES. USE TABLES AND PRINT OUTPUTS INSTEAD AS MUCH AS POSSIBLE.\n", "memory": "8g", "runnable": false, "difficulty": "hard", "language": "", "cpus": 2, "instruction_truncated": false, "category": "computational_biology", "compose": false, "has_solution": true, "oracle": null, "docker_image": "", "taskset": "bixbench-cli", "tags": ["computational_biology", "data_analysis", "bixbench"]}, "runs": []}